CDS

Accession Number TCMCG057C47067
gbkey CDS
Protein Id XP_018456517.1
Location join(592620..593150,593245..593310,593394..593567,593649..593779,593971..594047,594553..594734,594941..595018,595166..595298,595497..595557,595635..595716,596074..596202,596309..596452,596568..596667,596756..596887,597163..597233,597312..597484,597590..597683,597946..598043,598174..598309,598461..598567,598699..598794,598908..598995,599087..599207,599303..599414,599503..599626,599696..599773,599862..599980,600088..600141,600222..600324,600494..600622,600693..600804,600922..600953)
Gene LOC108827584
GeneID 108827584
Organism Raphanus sativus

Protein

Length 1288aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018601015.1
Definition PREDICTED: protein strawberry notch-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category KT
Description P-loop containing NTP hydrolase pore-1
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006323        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006333        [VIEW IN EMBL-EBI]
GO:0006334        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009408        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010286        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016584        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0031490        [VIEW IN EMBL-EBI]
GO:0031497        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034728        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042393        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065004        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071824        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0080135        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1900034        [VIEW IN EMBL-EBI]
GO:1900036        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990841        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGCAACCGCCGGTCCAACCTCCTCCGCCGCTTCCCGCTCCGCCGCACCCCAGCGGCGGAGGCGTTCCGAGAGGCGACGTTCAGGTCAGATGCGCGGGATGCCGCGTGATTCTGAGGGTGAAGACCGGCGTCGTGGAGTTCTCGTGTCCCACTTGCCAGCTCCCCCAAATGTTGCCGCCGGAGCTTCTTTCTAGGGCACGGCAACAGCAGCAGCAGCCTCCGCCGATTCAGCCGCTTCCTCCTCCGCCGCAGCAGCTGAAACCTATGAATTTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCCAGGCCTCCGGTTCCGGCGCACGGGATCGATCCGACGAAGATGCAATTGCCCTGCGCTAACTGCCAGGCGATTCTGAATGTTCCGCATGGGCTCACGAGGTTCTCTTGTCCTCAGTGCCACGTGGAGCTCGCGGTTGATGTCTCTAAGCTTAATCGATCTCTAACTGCTCCTCAATCTGCTCCTGCTCCTCCCTCGGTTCCTCCTCCCGAAGAAGTCAACGAGGAAGCTATTGAAGTTGAGAGGGAAGAGGATGAAGGTGGAACTGCGGGAGAAACGTTTATGGATTATCGTCCACCAAAGCTTTCAATTGGACCTCCTCATCCTGATCCGATTGTGGAAACATCATCTCTGTCTGCAGTGCAGCCTCCAGAGCCCACTTATGATCTGAGAATCAAGGAAGAGCTCGAAGAGTCAAAGGCGTTGTCGTGCTTGCAGATTGAGACATTAGTTTACGCTTGTCAGAGGCATCTTCAGCACCTTGCTGATGGTACCAGAGCGGGATTTTTTGTTGGAGATGGGGCTGGTGTGGGGAAAGGGCGGACAATTGCTGGGTTGATTTGGGAGAATTGGAAACATGGAAGGAGAAAAGCTTTGTGGATTTCTGTTGGCTCAGACTTGAAGTACGATGCAAGAAGGGACTTGGATGATGTGGGTGCCACATGCGTTGGAGTGAATCCTTTGAACAAGCTGCCCTATTCTAAGCTTGACTCAAAGAATGTTGGTGTTAAAGACGGAGTGGTATTCTTGACATACAATAGTCTCATTGCTTCCTCTGAGAAGGGGCGTTCTCGTTTGCAGCAACTTGTTCAGTGGTGTGGACCAGATTTTGATGGGCTCTTGATCTTTGATGAGTGCCACAAAGCAAAAAATTTGGTACCTGAAGCTGGGAGTCAGCCTACACGCATCGGGCAGGCAGTTGTTGACATTCAGGATAAGATCCCCCAAGCACGTGTTCTTTATTGCTCTGCTACTGGTGCATCTGAACCACGAAACATGGGCTATATGGTCAGGCTTGGTCTTTGGGGAGCTGGAACAAGTTTCAGTGATTTTAGTAAATTTCTAGGTGCGCTTGATAAAGGTGGAGTAGGAGCTTTGGAATTGGTTGCCATGGACATGAAAGCGAGGGGGATGTATGTATGCCGTACCCTGAGCTACAAAGGGGCTGAGTTTGAGATTGTTGAAGCTCCTTTAGAAGCAGGAATGGAGGCAATGTACAATAAGTCTGCAGAATTTTGGGCAGAACTACGGATAGAGATGTTGTCAGCAAATGCTTTTCTCCCTAGCGAGAAACCAAATTCTAGTCAATTGTGGAGACTATACTGGTCAAGCCATCAGCGTTTCTTTAGACACTTGTGTATGTCAGCTAAAGTTCCTGTAACTGTAAGGTTAGCTAAGAAAGCCTTATCAGCAAACAAGTGTGTGGTTATTGGCCTTCAGAGTACTGGAGAGGCTCGAACTGAAGAGGCTGTAACTAAATATGGTGTTGAGCTTGATGATTTTGTCTCTGGACCTCGAGAGCTCCTGTTGAAATTCGTGGAAGAGAATTATCCCCTGCCAGAGCAGCCTGAACCTCTCTCAGAGGATGATAGTGTTAAAGAACTTCATAGGAAGAGGCATTCGGCTTCACCTGGTGTCTCAGTTAGGGGGAGAGTAAGAAAGATGGCCAAGTGGAAACCAGATAGCGATGATGAAAGTTATTTGGAGTCTGAAGCTGAGTCTGCTGATGATTCTAATGATTCTGATGATGAGTTCCAGATATGTCAGATATGCAGTGGAGAAGATGAAAGGAAGAAGTTACTCCATTGTTCAGAATGTGACAAGCTTTTTCATCCAGATTGTGTAGTTCCTCCAGTTACAGACATACCATCTGAAGCATGGATATGCTATTCTTGCAAAGAAAAAACAGAGGAGTACATTCAAGCAAGGCGTATCTACATTGCGGAATTGCAGAAAAGGTATGAAGCTGCCTTGGAACGAAAACTAAAGATTTTAGAGATTATCCGGTCTCTAAATCTTCCAAACAATCCCTTAGATGATATCGTCGATCAGCTTGGGGGCCCTGACAAAGTCGCAGAAATAACAGGCAGACGAGGTATGCTTGTAAGAGCGTCTAATGGGAAAGGTGTTACATATCAAGCAAGAAACACAAAGGATATAACAATGGAAATGGTCAACATGCACGAGAAACAACTATTTATGGATGGTAAAAAGTTTGTTGCCATTATTTCTGAAGCTGGTTCAGCTGGTGTTTCGTTGCAAGCAGATAGAAGGGCAGCAAATCAGAGAAGAAGGGTTCATTTGACGTTAGAGCTTCCTTGGAGTGCTGATCGTGCAATTCAGCAATTTGGAAGAACTCACCGGTCAAATCAGACATCTGCACCTGAATACAGGCTACTTTTTACAAATCTTGGTGGGGAACGCCGCTTTGCCTCTATTGTTGCAAAGAGACTAGAAACTCTTGGTGCTTTAACACAGGGAGATCGCAGGGCGGGGCCTTCTTTGAGTGCCTACAATTATGATAGTAACTTTGGTAAAAAATCCTTGATGGTGATGTATAGAGGGATAATGGAGCAGGAGAAATTACCCGTTGTTCCACCTGGGTGCTCGACTGATGAACCAGAAACAATTAAAGAGTTTTTAACCAAGGCAAGGGCTGCGCTTATTGCGGTAGGAATAGTTAGGGACAGTGTGTTGGCTAATGGGAAAGACACTGGAAAGTTATCAGGACGTATTATTGATTCTGACATGCATGATGTTGGACGATTTTTGAATCGCCTCTTGGGATTGCCACCTGATATTCAGAATAGACTGTTTGAATTGTTTACGAGTATATTAGACGTGCTTGTACATAATGCTCGAATTGAAGGAACTTTTGATTCGGGAATCGTGGATATGAAAGCTAATAGCGTTGAACTGCTGACCACTCCAAAGACCGTCCATGTCGATCAAATGTCTGGTGCATCCACTATGCTCTTTACTTTCACTCTAGATCGTGGTATTACATGGGAGTCTGCAAGTTCAATGCTAGAGGGGAAGAGAAGGGATGGGCTTGGCTCGGCTAGTGATGGCTTTTATGAATCTAAGAGGGAATGGTTAGGAAGACGGCACTTCATATTAGCATTTGAGAGTACGGCCTCAGGTTTGTTTAAGACCGTCCGTCCTGCGGTAGGAGAGTCGATCAGAGAGATGTCTCTTTCAGAGTTGAAAACTAAGTACCGAAAACTCTCATCTCTGGAGAAGGCTCGTACCGGTTGGGAAGACGAGTACGAAGTTTCTTCTAAACAGTGTATGCACGGACCGAAGTGTAAGCTGGGAGAGTACTGCACAGTAGGAAGAAGAATACAGGAAGTAAATGTTGTGGGTGGCCTTATTCTTCCCATCTGGGGAACCATTGAGAAAGCTCTTTCCAAACAAGCCCGTCAAAGCCACAAGAGGATTAGAGTTATACGCATAGAGACTACGACGGATAATCAGCGAATAGTGGGCCTCTCTATCCCTAATGCAGCTGTAGAAACTGTGTTACAAGATTTAGCATGGGTTCAAGAGATCGATGATTGA
Protein:  
MSQPPVQPPPPLPAPPHPSGGGVPRGDVQVRCAGCRVILRVKTGVVEFSCPTCQLPQMLPPELLSRARQQQQQPPPIQPLPPPPQQLKPMNLQQQQQQQQQQPRPPVPAHGIDPTKMQLPCANCQAILNVPHGLTRFSCPQCHVELAVDVSKLNRSLTAPQSAPAPPSVPPPEEVNEEAIEVEREEDEGGTAGETFMDYRPPKLSIGPPHPDPIVETSSLSAVQPPEPTYDLRIKEELEESKALSCLQIETLVYACQRHLQHLADGTRAGFFVGDGAGVGKGRTIAGLIWENWKHGRRKALWISVGSDLKYDARRDLDDVGATCVGVNPLNKLPYSKLDSKNVGVKDGVVFLTYNSLIASSEKGRSRLQQLVQWCGPDFDGLLIFDECHKAKNLVPEAGSQPTRIGQAVVDIQDKIPQARVLYCSATGASEPRNMGYMVRLGLWGAGTSFSDFSKFLGALDKGGVGALELVAMDMKARGMYVCRTLSYKGAEFEIVEAPLEAGMEAMYNKSAEFWAELRIEMLSANAFLPSEKPNSSQLWRLYWSSHQRFFRHLCMSAKVPVTVRLAKKALSANKCVVIGLQSTGEARTEEAVTKYGVELDDFVSGPRELLLKFVEENYPLPEQPEPLSEDDSVKELHRKRHSASPGVSVRGRVRKMAKWKPDSDDESYLESEAESADDSNDSDDEFQICQICSGEDERKKLLHCSECDKLFHPDCVVPPVTDIPSEAWICYSCKEKTEEYIQARRIYIAELQKRYEAALERKLKILEIIRSLNLPNNPLDDIVDQLGGPDKVAEITGRRGMLVRASNGKGVTYQARNTKDITMEMVNMHEKQLFMDGKKFVAIISEAGSAGVSLQADRRAANQRRRVHLTLELPWSADRAIQQFGRTHRSNQTSAPEYRLLFTNLGGERRFASIVAKRLETLGALTQGDRRAGPSLSAYNYDSNFGKKSLMVMYRGIMEQEKLPVVPPGCSTDEPETIKEFLTKARAALIAVGIVRDSVLANGKDTGKLSGRIIDSDMHDVGRFLNRLLGLPPDIQNRLFELFTSILDVLVHNARIEGTFDSGIVDMKANSVELLTTPKTVHVDQMSGASTMLFTFTLDRGITWESASSMLEGKRRDGLGSASDGFYESKREWLGRRHFILAFESTASGLFKTVRPAVGESIREMSLSELKTKYRKLSSLEKARTGWEDEYEVSSKQCMHGPKCKLGEYCTVGRRIQEVNVVGGLILPIWGTIEKALSKQARQSHKRIRVIRIETTTDNQRIVGLSIPNAAVETVLQDLAWVQEIDD